The detailed information of tRNA gene sequence


Sequence ID>WENV170978743
Genome IDMTKZ01060448
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1371
End posion on genome 1295
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctaaggctgc
tRNA gene sequence 
GGCGGGGTAGCTCAGTTGGTCAGAGCGCGCGGTTCATACCCGCGTTGTCGGCGGTTCGAA
TCCGCCCCCCGCTACCA
Downstream region at tRNA end position 
aacatttcgc
Secondary structure (Cloverleaf model)
>WENV170978743	Met	CAT
                   c      ACCA aacatttcgc
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C C G C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        G     TTGTC
                    C - G
                    G - C
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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