The detailed information of tRNA gene sequence


Sequence ID>WENV170978750
Genome IDMTKZ01060511
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1000
End posion on genome 910
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atttgcgttt
tRNA gene sequence 
GGAGAGATGGCTGAGCTGGTCTAAGGCGCACGACTGGAAATCGTGTTTACTAGGAATAGT
AACCAGGGTTCGAATCCCTGTCTCTCCGCCA
Downstream region at tRNA end position 
gagaagaacc
Secondary structure (Cloverleaf model)
>WENV170978750	Ser	GGA
                   t      GCCA gagaagaacc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G T C C C     A
    T C G A        G      | | | | |     G
  G         G T C G       C A G G G     C
  G           + | |                 T T
  T         A G G C
    C T A          G     TTTACTAGGAATAGTAAC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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