The detailed information of tRNA gene sequence


Sequence ID>WENV170978757
Genome IDMTKZ01060821
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4530
End posion on genome 4606
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
caacgggtaa
tRNA gene sequence 
GGGCCTTTAGCTCAGTTGGTTAGAGCGGCCGGCTCATAACCGGTTGGTCCGGGGTTCAAG
TCCCTGAAGGCCCACCA
Downstream region at tRNA end position 
nngagcagct
Secondary structure (Cloverleaf model)
>WENV170978757	Met	CAT
                   a      ACCA nngagcagct
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A          T G
                    T     G T C C C     A
      T G A        A      | + | | |     A
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     TGGTC
                    G + T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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