The detailed information of tRNA gene sequence


Sequence ID>WENV170978762
Genome IDMTKZ01060896
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2621
End posion on genome 2711
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aagagtatta
tRNA gene sequence 
GGAGAGGTGCTAGAGTGGTTGAATAGGGCACACTCGAAATGTGTTATTCGAGAGTATTCT
CGGATCGTGGGTTCGAATCCCACCCTCTCCGttt
Downstream region at tRNA end position 
caattcccca
Secondary structure (Cloverleaf model)
>WENV170978762	Ser	CGA
                   a      Gttt caattcccca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A T C       G T G G G     C
    G         | | |                 T T
    T       A T A G
      T G A        G     TATTCGAGAGTATTCTCGGATC
                    G + T
                    C - G
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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