The detailed information of tRNA gene sequence


Sequence ID>WENV170978771
Genome IDMTKZ01061327
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 135
End posion on genome 59
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cacgaacagt
tRNA gene sequence 
GGGCCTATAGCTCAGTTGGTTAGAGCAGCCGACTCATAATCGGCCGGTCGCAGGTTCGAG
TCCTGCTGGGCCCACCA
Downstream region at tRNA end position 
aaaccgcgac
Secondary structure (Cloverleaf model)
>WENV170978771	Met	CAT
                   t      ACCA aaaccgcgac
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     C G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     CGGTC
                    G - C
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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