The detailed information of tRNA gene sequence


Sequence ID>WENV170978786
Genome IDMTKZ01061958
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1565
End posion on genome 1477
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gcgaaatcgt
tRNA gene sequence 
GGAGAGATGGCCGAGCGGTTGATGGCGCCAGTCTTGAAAACTGGTGATGCTGAAAGGCAC
CGGGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
gcccgacccc
Secondary structure (Cloverleaf model)
>WENV170978786	Ser	TGA
                   t      GCCA gcccgacccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G C C G       G G G G G     C
    G       + | | |                 T T
    T       T G G C
      T G A        G     TGATGCTGAAAGGCACC
                    C - G
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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