The detailed information of tRNA gene sequence


Sequence ID>WENV170978787
Genome IDMTKZ01061958
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1456
End posion on genome 1366
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
accccggctt
tRNA gene sequence 
GGAGAAGTACCCAAGTGGCCGAAGGGGCTCCCCTGCTAAGGGAGTAGTGTGCGAAAGCGC
AGCCCGGGTTCAAATCCCGGCTTCTCCGCCA
Downstream region at tRNA end position 
aaccccagca
Secondary structure (Cloverleaf model)
>WENV170978787	Ser	GCT
                   t      GCCA aaccccagca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     G G C C C     A
      T G A        A      | | | | |     A
    G       A C C C       C C G G G     C
    G         | | |                 T T
    C       A G G G
      C G A        G     TAGTGTGCGAAAGCGCAGC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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