The detailed information of tRNA gene sequence


Sequence ID>WENV170978791
Genome IDMTKZ01062038
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1304
End posion on genome 1214
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
taataaatat
tRNA gene sequence 
GGAGAGATGGTCGAGTTGGTTTAAGGCACCGGTCTTGAAAACCGGCGTAGGGGCAACCCT
ACCTAGGGTTCGAATCCCTATCTCTCCGCCA
Downstream region at tRNA end position 
aatggagaag
Secondary structure (Cloverleaf model)
>WENV170978791	Ser	TGA
                   t      GCCA aatggagaag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     A T C C C     A
    T T G A        G      | | | | |     G
  G         G C T G       T A G G G     C
  G           | + |                 T T
  T         A G G C
    T T A          A     CGTAGGGGCAACCCTACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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