The detailed information of tRNA gene sequence


Sequence ID>WENV170978792
Genome IDMTKZ01062038
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1210
End posion on genome 1119
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tccgccaaat
tRNA gene sequence 
GGAGAAGTACCCAAGTAGGCTCAAGGGGGCGGTTTGCTAAATCGTTAGTAGGGGTAACTC
TAGCATGGGTTCGAATCCCATCTTCTCCGCCA
Downstream region at tRNA end position 
gaaaacagct
Secondary structure (Cloverleaf model)
>WENV170978792	Ser	GCT
                   t      GCCA gaaaacagct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     T A C C C     A
    A T G A        A      | | | | |     G
  G         A C C C       A T G G G     C
  G           | | |                 T T
  C         A G G G
    T C A          G     TAGTAGGGGTAACTCTAGC
                    G + T
                    C - G
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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