The detailed information of tRNA gene sequence


Sequence ID>WENV170978795
Genome IDMTKZ01062230
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1985
End posion on genome 1909
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
gcaaacgtac
tRNA gene sequence 
CTGGGTGTGGCGCAGTTTGGTAGCGTGCTTGAATGGGGTTCAAGAGGCCGGAGGTTCAAA
TCCTCTCACCCAGACCA
Downstream region at tRNA end position 
aaaaaccttt
Secondary structure (Cloverleaf model)
>WENV170978795	Pro	GGG
                   c      ACCA aaaaaccttt
                     C - G
                     T - A
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
      T G A        G      + | | | |     A
    T       C G C G       G G A G G     C
    T       | | | +                 T T
    G       G C G T
      G T A        G     AGGCC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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