The detailed information of tRNA gene sequence


Sequence ID>WENV170978797
Genome IDMTKZ01062314
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4952
End posion on genome 5027
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
aagcttgcgt
tRNA gene sequence 
GGGGCCGTAGCTCAGTTGGGAGAGCGCTTGAATGGCATTCAAGAGGTCGAGGGTTCGATT
CCCTTCGGCTCCACCA
Downstream region at tRNA end position 
gtaagtccga
Secondary structure (Cloverleaf model)
>WENV170978797	Ala	GGC
                   t      ACCA gtaagtccga
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          T T
                    T     T T C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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