The detailed information of tRNA gene sequence


Sequence ID>WENV170978799
Genome IDMTKZ01062446
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1149
End posion on genome 1239
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcgcccgcgt
tRNA gene sequence 
GGAGAGTTGGCTGAGTGGTCGAAGGCGCACGACTGGAAATCGTGTTCACGTTAATAGCGT
GACCAGGGTTCAAATCCCTGACTCTCCGCCA
Downstream region at tRNA end position 
aacccaagta
Secondary structure (Cloverleaf model)
>WENV170978799	Ser	GGA
                   t      GCCA aacccaagta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     G T C C C     A
      T G A        G      | | | | |     A
    G       G T C G       C A G G G     C
    G         + | |                 T T
    T       A G G C
      C G A        G     TTCACGTTAATAGCGTGAC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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