The detailed information of tRNA gene sequence


Sequence ID>WENV170978801
Genome IDMTKZ01062578
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4620
End posion on genome 4530
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
nnnnnnnnaa
tRNA gene sequence 
GGAGAGTTGGCCGAGCGGTCGAAGGCGCACGCTTGGAAAGCGTGTAAGCTCCAAAAGGGC
TTCTAGGGTTCGAATCCCTAACTCTCCGCAA
Downstream region at tRNA end position 
agttttaaaa
Secondary structure (Cloverleaf model)
>WENV170978801	Ser	GGA
                   a      GCAA agttttaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     A T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       T A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAAGCTCCAAAAGGGCTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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