The detailed information of tRNA gene sequence


Sequence ID>WENV170978837
Genome IDMTKZ01063718
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 273
End posion on genome 358
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
attcgagccc
tRNA gene sequence 
GGAACGGTGGCAGAGTGGACAAATGCGCGCGCCTTGAAAGCGTGAGGGTGCAAGCCCCGG
GGGTTCGAATCCCTCCCGTTCCGCCA
Downstream region at tRNA end position 
agggtgttcg
Secondary structure (Cloverleaf model)
>WENV170978837	Ser	TGA
                   c      GCCA agggtgttcg
                     G - C
                     G - C
                     A - T
                     A - T
                     C - G
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    A       A T G C
      C A A        G     AGGGTGCAAGCCCC
                    C - G
                    G + T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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