The detailed information of tRNA gene sequence


Sequence ID>WENV170978845
Genome IDMTKZ01063908
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1582
End posion on genome 1492
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tggttttacc
tRNA gene sequence 
GGAGAGATGGCCGAGTGGTCTAAGGCGCACGCCTGGAGAGCGTGTTTACGCCAAAAGCGT
AACGTGGGTTCGAATCCCACTTTCTCCGCAA
Downstream region at tRNA end position 
tttttttgga
Secondary structure (Cloverleaf model)
>WENV170978845	Ser	GGA
                   c      GCAA tttttttgga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C T A        G     TTTACGCCAAAAGCGTAAC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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