The detailed information of tRNA gene sequence


Sequence ID>WENV170978847
Genome IDMTKZ01064048
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 693
End posion on genome 597
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
cagtagatat
tRNA gene sequence 
GGGGGTAGATGGGTGCTGGTGTGCCCTCTGGTCTTCAAAACCAGTGTTTGGGGTTAGTAG
CCTCATGGGTGGGTTCGATTCCCACATACTCCCGCCA
Downstream region at tRNA end position 
acattgaaat
Secondary structure (Cloverleaf model)
>WENV170978847	SeC(p)	TCA
                   t      GCCA acattgaaat
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     A - T
                     G   A          T T
                    A     C A C C C     A
      T C G        T      | | | | |     G
    G       T G G G       G T G G G     C
    G       + | | |                 T T
    T       G C C C
      G T          T     TGTTTGGGGTTAGTAGCCTCATGG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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