The detailed information of tRNA gene sequence


Sequence ID>WENV170978890
Genome IDMTKZ01065809
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2172
End posion on genome 2097
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gtctagaagc
tRNA gene sequence 
AGGTCCGTAGCTCAATTGGTAGAGCACTGGTCTCCAAAATCAGGTGTTGGGGGTTCGAGC
CCCTCCGGGCCTGCCA
Downstream region at tRNA end position 
atttttttaa
Secondary structure (Cloverleaf model)
>WENV170978890	Trp	CCA
                   c      GCCA atttttttaa
                     A - T
                     G - C
                     G - C
                     T + G
                     C - G
                     C - G
                     G - C          C G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTT
                    C - G
                    T - A
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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