The detailed information of tRNA gene sequence


Sequence ID>WENV170978891
Genome IDMTKZ01065814
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 860
End posion on genome 771
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
acgctttcgt
tRNA gene sequence 
GGAGAGGTGACCGAGTGGCCGAAGGTGGCGCCCTGCTAAGGCGTTGTGCGGGCAACCGTA
CCCCGGGTTCGAATCCCGGCCTCTCCGCCA
Downstream region at tRNA end position 
tccttcttct
Secondary structure (Cloverleaf model)
>WENV170978891	Ser	GCT
                   t      GCCA tccttcttct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G G C C C     A
      T G A        G      | | | | |     G
    G       G C C A       C C G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TGTGCGGGCAACCGTACC
                    G + T
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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