The detailed information of tRNA gene sequence


Sequence ID>WENV170978895
Genome IDMTKZ01066024
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 6475
End posion on genome 6402
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cggtctgcca
tRNA gene sequence 
AGGAGTGTAGCTCAATTGGCTAGAGCACCGGTTTCCAAAACCGGCGGTTGGGGGTTCGAG
TCCCTCCACTCCTGtgt
Downstream region at tRNA end position 
gtctgaggtg
Secondary structure (Cloverleaf model)
>WENV170978895	Trp	CCA
                   a      Gtgt gtctgaggtg
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     CGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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