The detailed information of tRNA gene sequence


Sequence ID>WENV170978897
Genome IDMTKZ01066067
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1344
End posion on genome 1274
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
gaccgaacac
tRNA gene sequence 
GGGGACGTGGTGTAGCGGGAGCACACTGCGGTCGCATCGCAGGAATGAGGGTTCGATTCC
CTTCGTCTCCAatg
Downstream region at tRNA end position 
ttcttccggt
Secondary structure (Cloverleaf model)
>WENV170978897	Ala	CGC
                   c      Aatg ttcttccggt
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     C - G
                     G - C          T T
                    T     T T C C C     A
        G A        G      + | | | |     G
      C     T G T G       G A G G G     C
      G     + | | |                 T T
      G     G C A C
        G A        A     GAAT
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  G       T
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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