The detailed information of tRNA gene sequence


Sequence ID>WENV170978911
Genome IDMTKZ01066541
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 296
End posion on genome 220
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
accataatgc
tRNA gene sequence 
GGCTCAGTAGCTCAGTTGGTTAGAGTGCTGGCCTGTCACGCCAGAGGTCGAGGGTTCGAG
CCCCTTCTGAGTCGCCA
Downstream region at tRNA end position 
atttaatttt
Secondary structure (Cloverleaf model)
>WENV170978911	Asp	GTC
                   c      GCCA atttaatttt
                     G - C
                     G + T
                     C - G
                     T - A
                     C - G
                     A - T
                     G - C          C G
                    T     T T C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G A G G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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