The detailed information of tRNA gene sequence


Sequence ID>WENV170978914
Genome IDMTKZ01066643
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2538
End posion on genome 2455
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
tccttgctac
tRNA gene sequence 
GCCGAAGTGGCGGAACGGTAGACGCGACGGTCTCAAACACCGTTGGGGGTTGCCCCATGT
GGGTTCGATTCCCACCTTCGGCACtt
Downstream region at tRNA end position 
ttggcggaat
Secondary structure (Cloverleaf model)
>WENV170978914	Leu	CAA
                   c      ACtt ttggcggaat
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T T
                    T     C A C C C     A
      C A A        G      | | | | |     G
    G       G G C G       G T G G G     C
    G         | | |                 T T
    T       A C G C
      A G          G     TGGGGGTTGCCCCAT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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