The detailed information of tRNA gene sequence


Sequence ID>WENV170978933
Genome IDMTKZ01067902
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 768
End posion on genome 676
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cttcccgcgc
tRNA gene sequence 
GGAGAAGTGGCCGAGTGGCTGAAGGCAGCCGCCTGCTAAGCGGTTAAGGGGTGTCAAGCT
CCTTCCCGGGTTCGAATCCCGGCTTCTCCGCCA
Downstream region at tRNA end position 
gtcccgccga
Secondary structure (Cloverleaf model)
>WENV170978933	Ser	GCT
                   c      GCCA gtcccgccga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     G G C C C     A
      T G A        G      | | | | |     G
    G       G C C G       C C G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     TAAGGGGTGTCAAGCTCCTTC
                    G + T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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