The detailed information of tRNA gene sequence


Sequence ID>WENV170978955
Genome IDMTKZ01068294
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1596
End posion on genome 1669
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aagtaaagaa
tRNA gene sequence 
AGGCCAGTAGCTCTAACGGATAGAGCACCGGACTCCAAATCCGGGTGTTGGGGGTTCGAA
TCCCTCCTGGCCTGnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170978955	Trp	CCA
                   a      Gnnn nnnnnnnnnn
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A A T        A      | + | | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GTGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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