The detailed information of tRNA gene sequence


Sequence ID>WENV170978995
Genome IDMTKZ01070556
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 75
End posion on genome 164
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccaaatacct
tRNA gene sequence 
GGGGAGGTGCCAGAGTGGACGAATGGGGCCGCCTGCTAAGTGGTTGTTGGAGTAAAATCC
AACCGAGGGTTCGAATCCCTCCCTCCCCGCtc
Downstream region at tRNA end position 
ttttaacgat
Secondary structure (Cloverleaf model)
>WENV170978995	Ser	GCT
                   t      GCtc ttttaacgat
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G A G G G     C
    G         | | |                 T T
    A       A T G G
      C G A        G     TGTTGGAGTAAAATCCAACC
                    G + T
                    C - G
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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