The detailed information of tRNA gene sequence


Sequence ID>WENV170979000
Genome IDMTKZ01070730
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1635
End posion on genome 1560
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
nnnnnncagt
tRNA gene sequence 
GCATCTTTAGCTCAGCTGGCAGAGCAACTGACTCTTAATCAGTGGGTCCGGGGTTCGAAT
CCCCGAAGATGTACCA
Downstream region at tRNA end position 
tttttaaaat
Secondary structure (Cloverleaf model)
>WENV170979000	Lys	CTT
                   t      ACCA tttttaaaat
                     G + T
                     C - G
                     A - T
                     T - A
                     C - G
                     T - A
                     T - A          T A
                    T     G C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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