The detailed information of tRNA gene sequence


Sequence ID>WENV170979001
Genome IDMTKZ01070735
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1276
End posion on genome 1351
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ggtatatggc
tRNA gene sequence 
GCCCCAGTGGCTTAGCTGGCAGAGCGGCTGACTTGTAATCAGCAGGCCCCGTGTTCAAAT
CACGGCTGGGGCTTCA
Downstream region at tRNA end position 
gaagtcaacc
Secondary structure (Cloverleaf model)
>WENV170979001	Thr	TGT
                   c      TTCA gaagtcaacc
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     G G C A C     A
      C G A        G      | | | | |     A
    T       T T C G       C C G T G     C
    G       + | | |                 T T
    G       G A G C
      C A          G     AGGCC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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