The detailed information of tRNA gene sequence


Sequence ID>WENV170979003
Genome IDMTKZ01070807
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 988
End posion on genome 912
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
tctttacatt
tRNA gene sequence 
CGGGACGTGGCGTAGTTTGGTAGCGCATCCGGCTGGGGGCCGGAAGGTCGCCAGTTCAAA
TCTGGCCGTCCCGACTA
Downstream region at tRNA end position 
gtgaaggccc
Secondary structure (Cloverleaf model)
>WENV170979003	Pro	GGG
                   t      ACTA gtgaaggccc
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C G G T C     A
      T G A        G      | | | | |     A
    T       T G C G       G C C A G     C
    T       + | | |                 T T
    G       G C G C
      G T A        A     AGGTC
                    T - A
                    C - G
                    C - G
                    G - C
                    G - C
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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