The detailed information of tRNA gene sequence


Sequence ID>WENV170979006
Genome IDMTKZ01070911
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 786
End posion on genome 877
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ccgaacgtac
tRNA gene sequence 
GGAGCGGTGTCCGAGTTGGTCTAAGGAGCACGACTGGAAATCGTGTAGCGGGGATGACTC
GCTCGTGGGTTCGAATCCCACCCGCTCCGCCA
Downstream region at tRNA end position 
cttacatgcc
Secondary structure (Cloverleaf model)
>WENV170979006	Ser	GGA
                   c      GCCA cttacatgcc
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C A C C C     A
    T T G A        G      | | | | |     G
  G         G C C T       G T G G G     C
  G           | | |                 T T
  T         A G G A
    C T A          G     TAGCGGGGATGACTCGCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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