The detailed information of tRNA gene sequence


Sequence ID>WENV170979010
Genome IDMTKZ01071269
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3734
End posion on genome 3644
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gagaagaagg
tRNA gene sequence 
GGAGAGGTACCGAAGTGGTCATAACGGGGCCGACTCGAAATCGGCTGTCCCTTTTCAGGG
ACCGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
ccatgaatac
Secondary structure (Cloverleaf model)
>WENV170979010	Ser	CGA
                   g      GCCA ccatgaatac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    G T G A        A      | + | | |     G
  G         A G C C       G G G G G     C
  T           | | |                 T T
  C         A C G G
    A T A          G     TGTCCCTTTTCAGGGACC
                    G - C
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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