The detailed information of tRNA gene sequence


Sequence ID>WENV170979011
Genome IDMTKZ01071269
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3621
End posion on genome 3528
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agatgaataC
tRNA gene sequence 
GGAGAGATGCCCGAGAGGCCGAAGGGGCACGATTGGAAATCGTGTGTGCCGCTAATACCG
GTACCGAGGGTTCGAATCCCTCTCTCTCCGTCA
Downstream region at tRNA end position 
cgtgaaggcc
Secondary structure (Cloverleaf model)
>WENV170979011	Ser	GGA
                   C      GTCA cgtgaaggcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C C       G A G G G     C
    G         | | |                 T T
    C       A G G G
      C G A        G     TGTGCCGCTAATACCGGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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