The detailed information of tRNA gene sequence


Sequence ID>WENV170979023
Genome IDMTKZ01071756
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 800
End posion on genome 887
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttgcttcata
tRNA gene sequence 
GCCGGGGTTGCTGAGCTTGGTACGGCGCGGGCCTGGAAAGCCCGTTCTCCCTTGGAGTGC
ATGGGTTCAAATCCCATCCCCGGCGCTA
Downstream region at tRNA end position 
tggtgattat
Secondary structure (Cloverleaf model)
>WENV170979023	Ser	GGA
                   a      GCTA tggtgattat
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T A C C C     A
      C G A        T      | | | | |     A
    T       G T C G       A T G G G     C
    T       | + | |                 T T
    G       C G G C
      G T A        G     TTCTCCCTTGGAGTGC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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