The detailed information of tRNA gene sequence


Sequence ID>WENV170979029
Genome IDMTKZ01072272
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1439
End posion on genome 1363
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
attagcacaa
tRNA gene sequence 
GGGCGGTTAGCTCAGGTGGTTAGAGCGCTGGTCTCACATACCAGAGGTCGTAGGTTCGAA
TCCTATACTGCCCACCA
Downstream region at tRNA end position 
tctttgtttt
Secondary structure (Cloverleaf model)
>WENV170979029	Val	CAC
                   a      ACCA tctttgtttt
                     G - C
                     G - C
                     G - C
                     C - G
                     G + T
                     G - C
                     T - A          T A
                    T     T A T C C     A
      G G A        A      + | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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