The detailed information of tRNA gene sequence


Sequence ID>WENV170979031
Genome IDMTKZ01072302
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 341
End posion on genome 252
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcccctagga
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTCGAAAGCGCCGGTTTGCTAAACCGGTGTACGGGTCACACCG
TACCATGGGTTCAAATCCCATCCTCTCCGCtt
Downstream region at tRNA end position 
tgccgactgc
Secondary structure (Cloverleaf model)
>WENV170979031	Ser	GCT
                   a      GCtt tgccgactgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T A C C C     A
      T G A        G      | | | | |     A
    G       G T C G       A T G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TGTACGGGTCACACCGTACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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