The detailed information of tRNA gene sequence


Sequence ID>WENV170979039
Genome IDMTKZ01072572
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 503
End posion on genome 419
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
ttcacggtat
tRNA gene sequence 
GCGCCCGTGGCGGAATCGGCAGACGCGCACGTTTGAGGGGCGTGTGAGTAACATCGTACC
AGTTCAAGTCTGGTCGGGCGCACCA
Downstream region at tRNA end position 
tcttaaaacc
Secondary structure (Cloverleaf model)
>WENV170979039	Leu	GAG
                   t      ACCA tcttaaaacc
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     T G G T C     A
      T A A        G      | | | | |     A
    C       G G C G       A C C A G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TGAGTAACATCGT
                    C - G
                    A - T
                    C - G
                    G - C
                    T + G
                  T       G
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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