The detailed information of tRNA gene sequence


Sequence ID>WENV170979044
Genome IDMTKZ01072936
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 5488
End posion on genome 5583
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gcttaagctt
tRNA gene sequence 
GGGAGTGGATGAGTCCCGGTGGGCTTTCCGGTCTTCAAAACCGGTGACGGGTCGCGTTGC
GGGCCGTGGTGGGTTCGACTCCCATCCATTCCCGCCt
Downstream region at tRNA end position 
agaaacggct
Secondary structure (Cloverleaf model)
>WENV170979044	SeC(p)	TCA
                   t      GCCt agaaacggct
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     T - A
                     G - C
                     G - C          T C
                    A     T A C C C     A
      C C C        T      + | | | |     G
    G       T G A G       G T G G G     C
    G       + | | +                 T T
    T       G C T T
      G G          T     TGACGGGTCGCGTTGCGGGCCGTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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