The detailed information of tRNA gene sequence


Sequence ID>WENV170979083
Genome IDMTKZ01074926
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 91
End posion on genome 1
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttggtgtctt
tRNA gene sequence 
GGAGGGATACCGAAGTGGCCATAACGGGCTGGTCTCGAAAACCAAGCGTGGCGCAAGTCA
CACGAGAGTTCGAATCTCTCTCCCTCCGCCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170979083	Ser	CGA
                   t      GCCA nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C T C     A
    G T G A        A      | | | | |     G
  G         A G C C       G A G A G     C
  C           | | |                 T T
  C         A C G G
    A T A          G     GCGTGGCGCAAGTCACAC
                    C   A
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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