The detailed information of tRNA gene sequence


Sequence ID>WENV170979088
Genome IDMTKZ01075153
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1082
End posion on genome 1007
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GCGGGAGTAGCTCAGTTGGTAGAGCATAACCTTGCCAAGGTTAGGGTCGCGGGTTCGAGT
CCCGTCTCCCGCTCGA
Downstream region at tRNA end position 
ggtaaagacg
Secondary structure (Cloverleaf model)
>WENV170979088	Gly	GCC
                   n      TCGA ggtaaagacg
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    A - T
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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