The detailed information of tRNA gene sequence


Sequence ID>WENV170979119
Genome IDMTKZ01076915
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1164
End posion on genome 1240
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ggcccttcgc
tRNA gene sequence 
GGGGGCGTAGTTCAGTTGGTTAGAACGCCGGCCTGTCACGCCGGAGGTCGCGAGTTCGAG
TCTCGTCGCTCCCGCCA
Downstream region at tRNA end position 
cttcctctcg
Secondary structure (Cloverleaf model)
>WENV170979119	Asp	GTC
                   c      GCCA cttcctctcg
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          T G
                    T     T G C T C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G A G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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