The detailed information of tRNA gene sequence


Sequence ID>WENV170979120
Genome IDMTKZ01076983
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1902
End posion on genome 1816
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttgcgtattg
tRNA gene sequence 
GGAGAGATGGCCGAGTGGTTTAAGGCGCCTGTCTTGAAAACAGGTATGGGGAAATCTCAT
CGTGGGTTCGAATCCCTCTCTCTCCGCag
Downstream region at tRNA end position 
aaccgtccac
Secondary structure (Cloverleaf model)
>WENV170979120	Ser	TGA
                   g      GCag aaccgtccac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      |   | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TATGGGGAAATCTCATC
                    C - G
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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