The detailed information of tRNA gene sequence


Sequence ID>WENV170979124
Genome IDMTKZ01077112
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3383
End posion on genome 3309
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
attcgccttt
tRNA gene sequence 
GGCCCACTAGCTCAATGGCAGAGCAGTTGACTCTTAATCAATTGGTTCGGGGTTCAAGTC
CCCGGTGGGTCACTA
Downstream region at tRNA end position 
aatatggcgg
Secondary structure (Cloverleaf model)
>WENV170979124	Lys	CTT
                   t      ACTA aatatggcgg
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T
                     C - G          T G
                    T     G C C C C     A
        A A        A      | | | | |     A
      T     C T C G       C G G G G     C
      G     | | | |                 T T
      G     G A G C
        C A        A     TGGTT
                    G + T
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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