The detailed information of tRNA gene sequence


Sequence ID>WENV170979127
Genome IDMTKZ01077184
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 907
End posion on genome 831
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgatgcacat
tRNA gene sequence 
GGCGAAGTAGCTCAGCTGGCTAGAGCAACCGGTTCATACCCGGTAGGTCGTTGGTTCGAA
TCTGACCTTCGCTACCA
Downstream region at tRNA end position 
tcgctttttt
Secondary structure (Cloverleaf model)
>WENV170979127	Met	CAT
                   t      ACCA tcgctttttt
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C A G T C     A
      C G A        A      | | + + |     G
    T       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     AGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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