The detailed information of tRNA gene sequence


Sequence ID>WENV170979132
Genome IDMTKZ01077409
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1163
End posion on genome 1088
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
acgtttacgt
tRNA gene sequence 
CGGAGCGTGGCGCAGCTGGAAGCGCGCATGCCTTGGGCGCATGAGGCCGCTGGTTCAAAT
CCAGTCGCTCCGACCA
Downstream region at tRNA end position 
agtaaggcgg
Secondary structure (Cloverleaf model)
>WENV170979132	Pro	TGG
                   t      ACCA agtaaggcgg
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     T G A C C     A
      C G A        G      + | | | |     A
    T       C G C G       G C T G G     C
    G       | | | |                 T T
    G       G C G C
      A A          G     AGGCC
                    C - G
                    A - T
                    T - A
                    G - C
                    C - G
                  C       C
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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