The detailed information of tRNA gene sequence


Sequence ID>WENV170979141
Genome IDMTKZ01077639
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 979
End posion on genome 886
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gataaaatac
tRNA gene sequence 
GGAGAGGTACCGAAGTGGTCGTAACGGGATCGACTCGAAATCGATTTGGGGGCCACAAGC
TCCCACGGGGGTTCGAATCCCCCTCTCTCCGCCA
Downstream region at tRNA end position 
gaatacattg
Secondary structure (Cloverleaf model)
>WENV170979141	Ser	CGA
                   c      GCCA gaatacattg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C C C C C     A
    G T G A        A      | | | | |     G
  G         A G C C       G G G G G     C
  T           | | |                 T T
  C         A C G G
    G T A          G     TTGGGGGCCACAAGCTCCCAC
                    A - T
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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