The detailed information of tRNA gene sequence


Sequence ID>WENV170979142
Genome IDMTKZ01077639
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 757
End posion on genome 664
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgttagaaac
tRNA gene sequence 
GGAGAGATGTCCGAGCGGCTGAAGGAGCACGACTGGAAATCGTGTGTACGCCCCCAAAGG
TGTACCGCGGGTTCAAATCCCGCTCTCTCCGCCA
Downstream region at tRNA end position 
ttattttgtg
Secondary structure (Cloverleaf model)
>WENV170979142	Ser	GGA
                   c      GCCA ttattttgtg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C G C C C     A
      C G A        G      | | | | |     A
    G       G C C T       G C G G G     C
    G         | | |                 T T
    C       A G G A
      T G A        G     TGTACGCCCCCAAAGGTGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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