The detailed information of tRNA gene sequence


Sequence ID>WENV170979151
Genome IDMTKZ01077971
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 40985
End posion on genome 40914
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
attctattaa
tRNA gene sequence 
GGTGTCGTAGCCAAGTGGTTAGGCAGCGGTCTGCAAAACCGCGAACGCCGGTTCGAATCC
GGCCGACACCTCtt
Downstream region at tRNA end position 
ttttgtgaat
Secondary structure (Cloverleaf model)
>WENV170979151	Cys	GCA
                   a      TCtt ttttgtgaat
                     G - C
                     G - C
                     T - A
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     C G G C C     A
        G A        A      | | | | |     G
      T     A C C G       G C C G G     C
      G       | | |                 T T
      G     A G G C
        T T        A     GAAC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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