The detailed information of tRNA gene sequence


Sequence ID>WENV170979159
Genome IDMTKZ01078234
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2054
End posion on genome 2129
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tcacttgctt
tRNA gene sequence 
GGCCCCGTCGTCTAGCCCGGTCTAGGACACCGCCCTTTCACGGCGATAACACGAGTTCAA
ATCTCGTCGGGGTCACtt
Downstream region at tRNA end position 
cgagtcgcta
Secondary structure (Cloverleaf model)
>WENV170979159	Glu	TTC
                   t      ACtt cgagtcgcta
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G C T C     A
    C C G A        C      | | | | |     A
  C         T C T G       A C G A G     C
  G         + | | |                 T T
  G         G G A C
    T C T A        A     TAAC
                    C   A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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