The detailed information of tRNA gene sequence


Sequence ID>WENV170979170
Genome IDMTKZ01079162
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2693
End posion on genome 2620
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
nnnnnntcga
tRNA gene sequence 
GGGCCTGTGGTCTAGCTGGTTATGACATCGCCTTCACACGGCGGGGATCACGCGTTCGAA
TCGCGTCGGGCCCAttc
Downstream region at tRNA end position 
ggattcggat
Secondary structure (Cloverleaf model)
>WENV170979170	Val	CAC
                   a      Attc ggattcggat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     T G C G C     A
      C G A        G      | | | | |     G
    T       T C T G       A C G C G     C
    G         | | |                 T T
    G       T G A C
      T T A        A     GGATC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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