The detailed information of tRNA gene sequence


Sequence ID>WENV170979174
Genome IDMTKZ01079279
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 5162
End posion on genome 5085
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
acattatcgc
tRNA gene sequence 
GGGGTCGTAGCTCAGCCCGGTTAGAGCGCTGCACTGTCACTGCAGAGGTCGCGGGTTCGA
GTCCCGTCGACCCCGCCA
Downstream region at tRNA end position 
gaaaacctaa
Secondary structure (Cloverleaf model)
>WENV170979174	Asp	GTC
                   c      GCCA gaaaacctaa
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C          T G
                    T     T G C C C     A
    C C G A        A      + | | | |     G
  C         C T C G       G C G G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    A - T
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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