The detailed information of tRNA gene sequence


Sequence ID>WENV170979178
Genome IDMTKZ01079294
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 244
End posion on genome 320
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ttggctccat
tRNA gene sequence 
CGAGGTGTAGCGCAGCTTGGTAGCGCGTTTGGTTCGGGACCAAAAGGCCCAGGGTTCAAA
TCCCTGCACCTCGACCA
Downstream region at tRNA end position 
caaaaatcaa
Secondary structure (Cloverleaf model)
>WENV170979178	Pro	CGG
                   t      ACCA caaaaatcaa
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     G T C C C     A
      C G A        A      | | | | |     A
    T       C G C G       C A G G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGCC
                    T - A
                    T - A
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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